Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929642.1_cds_XP_016476930.1_68712
CDS Infomation

[gene=LOC107798442] [db_xref=GeneID:107798442] [protein=uncharacterized protein LOC107798442 isoform X4] [protein_id=XP_016476930.1] [location=join(8779..9055,11234..11468,12163..12268,12361..12502,12664..12928,13221..13588,14695..14750,15148..15298,15522..15696,16251..16473,18931..19434,20176..20233,27056..27099)] [gbkey=CDS]
Sequence

ATGAATTTATGCAAATTTCTCGCCTTCGTGTTAGGGTTTGTTCTTTGCGTGAGTACTTGT
ACTTCCGGAGAATCGTCGACATGTTTGACGGTGTATAAAGAAGGCGGTGCACCTGCGGTA
TTTCAATCTCCAAAATGCCCTCGCTGGAAGCTTCCAGATCATGGTTCCGAATCCAAATCG
CCGAATGCGAGGTGCCAAACAGCCTTGCATCAAGGTCGCCGCAAGTCTCAAGAAGATCGA
ATTCTCTGTGCTCTCGATATTCGCATCCCTTTCCCCGGTGTTAATGGTATTACTGAGGTT
ACAGTTGGTGTTGTCGCAGTTTTTGATGGTCATAATGGTGCTGAAGCAAGTGAAATGGCA
TCAAAGCTATTACTGCAGTATTTCACACTGCATACATTTTTTCTTCTTGATGCAACATTT
TCAGTTCTTTCAAGGAAAGTGATTGGACTCTTGCCAAATGAAAGAGGACAGAGTACTCTG
AACTGGAATCCGGATGAGATGAACTTGGGGAGGCTCAAGCTGACTGTGTCTTCAATCATT
GATCGATCTTTTCACTTGGAAATATTGAGGGAAGCATTGCTAAGGGCAATTGATGATATT
GATTCTGCATTTTCAAGGGATGCATTTAGACACAATTTTGATTCTGGCTCTACCGCCACA
GTTATACTTATGGCAGAAAATCAAATTTTAGTTGCCAATATCGGAGATTCAAAGGCATTT
TTATGTTCTGAAGAATATAAATCTCAAGAAGAGGCTAAAGCTAATTTATTGAGGTTATAT
AGGCAAACAAGAGGCTTTGGGGTTTTCGAACCTGTGAAGAACTTCAATAGCTTCAAGTTG
GTAGCTTCTGACCAGTGGCCTTTTCTGATTTCCAAGGAATTGACTAGAGACCACCACCCA
GATAGGGATGACGAGAGGTCTCGAGTGGAGACTGCAGGAGGACATGTCTCTGAATGGAGT
GGCGTAGCTAGGGTTAATGGTCAATTGGCTGTTTCAAGAGCAATAGGTGATGTGTCTTTT
AAAAGTTATGGCGTTATATCTGCACCTGAGGTCACTGATTGGCAACCTTTGACAGCCAAT
GACAGCTATTTGGTGGCTGCTTCTGATGGCGTTTTTGAAAAGCTTAGCTCACAGGATATT
TGTGACATATTGTGGAATTTACATGCTGATTTCACTGTGCGATCGGAACTCACTTATTCA
TGTTCATATTCCTTAGCTGATTGCATAGTAAATGCTGCTTTTGAAAAGGGAAGTATGGAC
AACATGGCAGCTGTTGTCCTTCCATTTAGATTGAATGATTCACTGCAAAGGTTGGCGAAG
AAAACACATGCAGGAATGAGAAAATTCGATTGCTCATCTTCAGGGGATAGCAATTATATT
TCTCAACATTCAGTGCTTACTGAGGAGGAGCATGGGCATCCTCTTATTTCCAATTTTGGC
AGATTATTGGTTGAAGGAAAACACAGCAATTATGGATGTTTCTATCTATCTGAGAACCTC
GATGTTAACGATGAGTATACATTCTGGGTTCAGAAGGACATCCATGAATATGAACATGAG
CTCCTTCATGCTTTACCTGATAGCATTGGTCAGAATCCGGGTGGAGCTTTGGATTTATAT
AATGATCAGCACATGTGTGTTCATTTTGGGATGAACTTTAGTGAGAACAAGGACCAGTGC
ATTAATCCTGAAGGCTTTGCTAGGTTCCTTGGTTTGCTCGAATCTATTCCGTTCAATGAT
AGCAGTACAAATGATCATGCCAGAGTAGATTCAAGGTACATTCTAAAGAAGAAATATGAT
CGTGGATCATATGGTGAAGTTTGGCTAGCTTTTTACTGGAATTGTTCTCATGTCGTCAAG
TCTTCAATAAGTAACAATTTCTCAGCTAATATTACGGATAGAGGGGCGAATAGTGAAAGA
AGGAAGGATTCATCATCTGCTGATGTCTATGATGATGGCCCTTCTGAAGGAAGCATGTTC
ATTTTGAAGCGTATCATGGTGGAGAAAGGCACCTCTGTCTATTTAAGTGGGCTACGGGAG
AAATATTTTGGTGAAATTTTCTTGAATGCTCATACTGTTCTTGGAGGTTCATTGCGAGCT
GAAGAATCAAATTCCCTCCTGTTAAATATACGACCAGATTTTCATGATCCTGTGGAAAGA
AATGCAGTAGTGGATCTAGGGATCCAGGGCTCCTTGAAGTTCGATAAAGTATATGGTAAA
AAGAAGGAAACGCTGAGAGCTGCCCCTGAGGAGGGTCTTAATCACATTGCCAGATATGTC
GAGTCTTTTGAGTCTCGATCCAATGATATATGGCTTGTGTTTCGCCATGAAGGGATATCC
TTATCAAAGCTTCTCTATACCGCTGAAGAAGTGATAAATAATTCGGAGGAAGGAAATGAA
AATATAAAGCATATTCAGATATTGCATCCTTCAAAATGGTGGAAATGGTTGAAAACAACA
GAAGCAGGGCAAGAGGAAATGCGCAATCTGATTCGGCAATTGTTGATGGCACTTAAATCT
TGTCATGATCGTAATATCACCCATAGAGATATAAAACCTGGCGTATTATTGACTTTGGTA
GCGCAGTGGATGATTTCACATTGA

Peptide Sequence

PEP ID

XP_016476930.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107798442 isoform X4 [Nicotiana tabacum]
Sequence

MNLCKFLAFVLGFVLCVSTCTSGESSTCLTVYKEGGAPAVFQSPKCPRWKLPDHGSESKS
PNARCQTALHQGRRKSQEDRILCALDIRIPFPGVNGITEVTVGVVAVFDGHNGAEASEMA
SKLLLQYFTLHTFFLLDATFSVLSRKVIGLLPNERGQSTLNWNPDEMNLGRLKLTVSSII
DRSFHLEILREALLRAIDDIDSAFSRDAFRHNFDSGSTATVILMAENQILVANIGDSKAF
LCSEEYKSQEEAKANLLRLYRQTRGFGVFEPVKNFNSFKLVASDQWPFLISKELTRDHHP
DRDDERSRVETAGGHVSEWSGVARVNGQLAVSRAIGDVSFKSYGVISAPEVTDWQPLTAN
DSYLVAASDGVFEKLSSQDICDILWNLHADFTVRSELTYSCSYSLADCIVNAAFEKGSMD
NMAAVVLPFRLNDSLQRLAKKTHAGMRKFDCSSSGDSNYISQHSVLTEEEHGHPLISNFG
RLLVEGKHSNYGCFYLSENLDVNDEYTFWVQKDIHEYEHELLHALPDSIGQNPGGALDLY
NDQHMCVHFGMNFSENKDQCINPEGFARFLGLLESIPFNDSSTNDHARVDSRYILKKKYD
RGSYGEVWLAFYWNCSHVVKSSISNNFSANITDRGANSERRKDSSSADVYDDGPSEGSMF
ILKRIMVEKGTSVYLSGLREKYFGEIFLNAHTVLGGSLRAEESNSLLLNIRPDFHDPVER
NAVVDLGIQGSLKFDKVYGKKKETLRAAPEEGLNHIARYVESFESRSNDIWLVFRHEGIS
LSKLLYTAEEVINNSEEGNENIKHIQILHPSKWWKWLKTTEAGQEEMRNLIRQLLMALKS
CHDRNITHRDIKPGVLLTLVAQWMISH

Transcript Sequence

Gene sequence data has not been registered.